CDS

Accession Number TCMCG017C07395
gbkey CDS
Protein Id OMP05112.1
Location join(17010..17192,17292..17426,17509..17578,17667..17731,17898..18018,18531..18622,18986..19050,19135..19222,19422..19487,19620..19735,20104..20194,20791..20874,20983..21075,21186..21281,21395..21480,21643..21721,21861..21974,22193..22288,22358..22421,22546..22835,24000..24055,24769..24810,25844..25961,26049..26129,26514..26593,27496..27550,27627..27696,27818..28007,28116..28239,28417..28435,28570..28652)
GeneID InterPro:IPR000185
Organism Corchorus olitorius
locus_tag COLO4_09042

Protein

Length 1003aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01014105.1
Definition Protein translocase subunit SecA [Corchorus olitorius]
Locus_tag COLO4_09042

EGGNOG-MAPPER Annotation

COG_category U
Description Belongs to the SecA family
KEGG_TC 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4
KEGG_Module M00335        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko02044        [VIEW IN KEGG]
KEGG_ko ko:K03070        [VIEW IN KEGG]
EC -
KEGG_Pathway ko02024        [VIEW IN KEGG]
ko03060        [VIEW IN KEGG]
ko03070        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
map03060        [VIEW IN KEGG]
map03070        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008320        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010109        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015399        [VIEW IN EMBL-EBI]
GO:0015405        [VIEW IN EMBL-EBI]
GO:0015440        [VIEW IN EMBL-EBI]
GO:0015450        [VIEW IN EMBL-EBI]
GO:0015462        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022804        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0022884        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033220        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042626        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0042887        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043492        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071806        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1904680        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTACTGTGCCTTGTCTTCTCAAAGCTTCTTTCCTCACGCCTAAACCCCTCCAACAACGTAAAGTCCTTCCTTGTACAAAACCCGCCTCGCCTTTCCTCTTCCCTTCCTCTTCTGTTTCTCGCTACACCCTTCAACGCCTTCGTTTTAATGGGCGAACGCATATAGCTGCATCTTTCAAGGAGAATTTTGGTCTTTTTAGGAAGACTTTCGGTGATTTTTCTAGCTTAAACTACTGGGTTGTTCGGGATTATTATCGTCTTGTTGACACTGTTAATGCACTTGAGCCAGAGATTCAGAAGCTTTGTGATGAGCAGCTGACTGCGAAAACTTCTGAGTTTAAGAAAAGGTTGGGCCAAGGAGATACTCTTTCAGATATCCAAGCTGAGGCATTTGCGGTTGTTCGTGAAGCTGCAAGAAGGAAGCTTGGCATGCGCCATTTTGATGTGCAGATTATTGGTGGAGCGGTGCTTCATGATGGGTCCATTGCTGAGATGAAAACAGGGGAGGGAAAAACATTAGTTTCCACATTAGCTGCATACCTTAATGCACTTACTGGTGATGGCGTCCATGTGGTAACTGTGAATGATTATCTTGCTCAACGTGATGCTGAGTGGATGGGTCGTGTTCATCGCTTCTTAGGTCTTTCGGTTGGGCTTATTCAGGAACTAGGCTTCGATTATCTCCGGGATAATCTTGCTGGAAACAGTGATCAACTTGTAATGAGATGGCCAAAACCATTTCATTTTGCAATTGTTGATGAAGTTGATTCTGTTCTCATTGATGAGGGAAGAAATCCTTTGTTAATCAGTGGTGAGGCTAGTAAAGATGCTGCACGTTATCCAGTAGCTGCTAAGGTGGCAGAGCTGCTAATGAGGGGTCTTCATTACAATGTTGAGCTCAAAGATAATTCTGTGGAGTTGACTGAAGATGGAATTGCACTTGCTGAGTTGGCTCTTGAAACAAATGATCTGTGGGATGAAAATGATCCCTGGGCAAGATTTGTGATGAATGCTTTAAAAGCTAAAGAATTTTATCGGCGGGATGTCCAATACATAGTCAGAAATGGAAAAGCTCTCATCATCAACGAGCTAACAGGCAGAGTTGAAGAGAAGCGGAGATGGTCTGAAGGGATTCACCAGGCCGTAGAAGCAAAAGAAGGTCTGAAGATTCAGGCTGATTCAGTTGTTGTGGCCCAAATCACTTACCAATCACTATTTAAGCTCTATCCAAAGCTCTCAGGGATGACTGGGACTGCAAAAACTGAAGAGAGAGAGTTCTTGAAAATGTTCCAGATGCCTGTGATTGAAGTGCCCACTAATCTTCCAAATATTCGTAAAGATTTACCCATACAAGCTTTTGCAACTGCTCGCGGGAAATGGGAATATGTTAGCCAAGAAGTGGAACACATGTTTAGACAGGGCCGTCCGGTTTTAGTCGGAACCACTAGTGTTGAGAACTCTGAATATCTGTCAGATCTGCTGAAGGAGAGAAATATTCCTCACAATGTCCTGAATGCACGGCCAAAGTATGCAGCAAGGGAAGCAGAAACTATTGCCCAAGCAGGGCGGAAGTATGCTATAACCATTTCCACGAATATGGCAGGCAGAGGAACTGACATTATTCTCGGGGGAAATCCAAAAATGCTCGCAAGAGAAATTATAGAGGACAGCTTGCTCCCTTTTCTGACAAGAGAATCTCCTAATGTTGAAGTTGATGACATGGAACTTTCAAGAAAGGTGTTATCAAAGATAAAGGTTGGACCATCATCAATGGCTTTGCTAGCTAAAGCTGCATTAATGGCAAAATATGCTGGCAAAAGTGAGGGAAAGAGCTGGACATATCAGGAGGCAAAATCTATCCTTTCAGATTCTGTTGAAATGAGCCAGTCAATGCCTTTGGAAGAGCTGCAGAAGCTTATTGATGAACAGTCTGAGATGTACCCTCTTGGCCCTTCTATAGCCATTACTTATTTGTCAGTTCTCAAAGATTGTGAAGCACACGGCACCAAAGAAGGGTCTGAAGTTAAAAGGCTTGGGGGGCTTCATGTGATTGGCACATCTTTGCATGAATCCCGTAGAATAGATAACCAGCTTCGTGGTAGAGCAGGAAGGCAAGGGGATCCTGGATCCACAAGGTTTATGGTGAGTTGTGGTAGGTTCCCAATGGTAGACAGGGAGATGGTGGAAAGCTTGCAAGATGAGATGTTTCAAAAGTTTAATTTTGACACTGAGTGGGCTGTAAACCTTATTTCAAAAATTACAAATGATGAAGATATACCTATTGAAGGTAATGCAATTGTAAAGCAGCTTTTGGCACTCCAAATCAATGCAGAGAAGTACTTCTTTAACATAAGAAAGAGCCTGGTTGAGTTCGATGAAGTCCTAGAGGTTCAAAGAAAGCATGTCTATGACCTCAGGCAATTGATTTTGACGGGTGATAATGAAAGTTGTTCCCAACATATATTTCGGTACATGCAAGCAGTGGTAGATGAAATTGTCTTTGGAAATGCTGATCCAATGAAGCATCCAAGATACTGGAATTTGGGTAAACTTTTGAAAGAGTTCATTGCTATTGCGGGGAAGCTATTGGATGACTCATTTGCGGCCATTACTGAGGAAGATTTGTTCCAATCTCTTAAACAACTACATGAATCAAATTCTGTAGATATTGATGATTTTCACCTTCCAAACTTGCCAAATCCTCCAGATGGCTTCAGAGGGATCCGCAGAAAAAATTCTTCTTTGAAACGCTGGCTTGCTATTTGTTCTGATGATTCAACAAAGAATGGGAGGTACCGTCCAACAACTAATCTTCTTCGCAAATACCTTGGGGATATTTTGATTGCTTCATATGTGAACGTTGTAGAAGAATCTGGTTACGATGATGCATACATAAAAGAAATTGAGCGAAGTACATCTGCTCTAGAGAGCAGTTCTTGTCAAGACGCTGGATTGTTTCTGGAGAGATCATCTTGTAAACATGAACAGACTGAGTTCAGCGGTACTTAA
Protein:  
MATVPCLLKASFLTPKPLQQRKVLPCTKPASPFLFPSSSVSRYTLQRLRFNGRTHIAASFKENFGLFRKTFGDFSSLNYWVVRDYYRLVDTVNALEPEIQKLCDEQLTAKTSEFKKRLGQGDTLSDIQAEAFAVVREAARRKLGMRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGDGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQELGFDYLRDNLAGNSDQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDAARYPVAAKVAELLMRGLHYNVELKDNSVELTEDGIALAELALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEREFLKMFQMPVIEVPTNLPNIRKDLPIQAFATARGKWEYVSQEVEHMFRQGRPVLVGTTSVENSEYLSDLLKERNIPHNVLNARPKYAAREAETIAQAGRKYAITISTNMAGRGTDIILGGNPKMLAREIIEDSLLPFLTRESPNVEVDDMELSRKVLSKIKVGPSSMALLAKAALMAKYAGKSEGKSWTYQEAKSILSDSVEMSQSMPLEELQKLIDEQSEMYPLGPSIAITYLSVLKDCEAHGTKEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSCGRFPMVDREMVESLQDEMFQKFNFDTEWAVNLISKITNDEDIPIEGNAIVKQLLALQINAEKYFFNIRKSLVEFDEVLEVQRKHVYDLRQLILTGDNESCSQHIFRYMQAVVDEIVFGNADPMKHPRYWNLGKLLKEFIAIAGKLLDDSFAAITEEDLFQSLKQLHESNSVDIDDFHLPNLPNPPDGFRGIRRKNSSLKRWLAICSDDSTKNGRYRPTTNLLRKYLGDILIASYVNVVEESGYDDAYIKEIERSTSALESSSCQDAGLFLERSSCKHEQTEFSGT